Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  117 bits (294), Expect = 1e-31
 Identities = 74/214 (34%), Positives = 118/214 (55%), Gaps = 6/214 (2%)

Query: 11  ILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFST--DLVILDRQLHDGDSLKH 68
           +L+ EDD L+  G+   L   G+  E V  +        +   D+++LD  L D D LK 
Sbjct: 3   VLVCEDDELIASGIVAGLTAQGFTVERVASAGAARAMLRAATFDIMVLDLGLPDEDGLKL 62

Query: 69  LPHWLMLKA-LPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPLGS- 126
           L         +PV++LTA+  V  R++GL+AGA DY+LKPF  +EL AR++  LR +   
Sbjct: 63  LQQQRSQGLEIPVLILTARDSVTNRVDGLQAGADDYLLKPFDLRELAARLQTLLRRVAGR 122

Query: 127 --SVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIWGYQ 184
             +++ +  +  D ++R       PV+L  +E  LL  LL N GRV   ++L + ++G+ 
Sbjct: 123 SVNLIEHGRLAYDPSSRETFLGGEPVDLSRREQALLQALLHNKGRVLSSEQLKDSVYGFN 182

Query: 185 YFPTTRTVDNHILHLRQKLPQLDIETLRGVGYRL 218
               +  ++ HI HLR+KL    +ET+RG+GYRL
Sbjct: 183 DELESNALNVHIHHLRRKLGNGIVETVRGLGYRL 216