Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (299), Expect = 4e-32
 Identities = 74/221 (33%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 8   MKRILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQ--VEKHWFSTDLVILDRQLHDGDS 65
           M RIL IEDD +  + +   L  HG   +WV   ++  V       DL+ LDR L + D 
Sbjct: 1   MTRILTIEDDAVTAREIVAELSSHGLDVDWVDNGREGLVRAVSGDYDLITLDRMLPELDG 60

Query: 66  LKHLPHWLMLK-ALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPL 124
           L  +     +  + P+++++A  +V++R+ GL+AG  DY+ KPF+  E+ AR+E  LR  
Sbjct: 61  LAIVTTLRTIGVSTPILMISALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRK 120

Query: 125 GS-----SVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNL 179
            +     + L  AD+ +++ +R       P+ L P E++LL  L++N G++  R  +   
Sbjct: 121 STVQEFETALRVADLELNLISREASRADQPLSLLPTEYKLLEFLMRNTGQILSRMMIFEE 180

Query: 180 IWGYQYFPTTRTVDNHILHLRQKL--PQLD--IETLRGVGY 216
           +WGY + P T  +D HI  LR+K+  P L   I T+RG GY
Sbjct: 181 VWGYHFDPGTNLIDVHIGRLRKKIDPPGLTPLIRTVRGSGY 221