Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., Two-component transcriptional regulatory protein BasR/PmrA (activated by BasS/PmrB) from Variovorax sp. SCN45

 Score =  125 bits (314), Expect = 6e-34
 Identities = 82/215 (38%), Positives = 116/215 (53%), Gaps = 6/215 (2%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFSTDL--VILDRQLHDGDSLK 67
           RILL+EDDT L   +  YL    +  +             S     V+LD  L DGD L 
Sbjct: 2   RILLVEDDTSLADAVCSYLIAKAFVVDVAPSLADARGALLSVQYAAVLLDLHLGDGDGLS 61

Query: 68  HLPHWLMLKALP-VIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPLGS 126
            LP    L   P VIVLTA+ +V  RI GL AGA DY++KP+   ELLAR+ A  R   +
Sbjct: 62  LLPQVRALPERPIVIVLTARDQVTDRIRGLDAGADDYLIKPYDPAELLARLRAVERRRSA 121

Query: 127 S---VLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIWGY 183
           S   VL    + +D+A+  V  N  P+ L  KE+ LL ++   P R++ R+ L + ++G+
Sbjct: 122 SSSPVLQLGTLEIDLAHDMVRKNGAPITLTQKEWALLRVMATRPERIHTRENLADALYGF 181

Query: 184 QYFPTTRTVDNHILHLRQKLPQLDIETLRGVGYRL 218
                + T++  I  LR+KL +  I+TLRG+GYRL
Sbjct: 182 GDEADSNTLEVFISRLRRKLGRSHIQTLRGLGYRL 216