Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Copper-sensing two-component system response regulator CusR from Variovorax sp. SCN45

 Score =  129 bits (324), Expect = 5e-35
 Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 13/224 (5%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFSTD----LVILDRQLHDGDS 65
           RIL+IED+  LG  L+  L ++GY  +       +E  + +T+    LV+LD  L   D 
Sbjct: 2   RILVIEDEPKLGDYLKKGLEENGYVVDIARDG--IEGKYLATEGDYALVLLDVMLPGIDG 59

Query: 66  LKHLPHWLMLKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLR--- 122
              L      K +PV+VLTA+ +VE R++GL+ GA DY++KPFS  ELLAR++A LR   
Sbjct: 60  FAVLQAIRRTKNVPVLVLTARDKVEDRVQGLQQGADDYLVKPFSFSELLARVQALLRRGK 119

Query: 123 PLGSSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIWG 182
           P  S+ L  AD+ +D+ +R    N+  ++L  KEF LL++LL+  G++  R  L   +W 
Sbjct: 120 PQESTTLRLADLELDLVSRKCFRNRARLDLTAKEFTLLVVLLRRRGQILSRTTLAEQVWD 179

Query: 183 YQYFPTTRTVDNHILHLRQKLPQ-LDIE---TLRGVGYRLKGAS 222
             +   T  V+  I  LR KL    D++   T+RG+GY L+  S
Sbjct: 180 MNFDSDTNVVEVAIRRLRSKLDDPFDVKLLHTVRGMGYVLEDRS 223