Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  117 bits (293), Expect = 2e-31
 Identities = 83/223 (37%), Positives = 116/223 (52%), Gaps = 11/223 (4%)

Query: 7   AMKRILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQ--VEKHWFSTDLVILDRQLHDGD 64
           AM RILLI+DD  L   L  Y    G   E   +  +   +      D  ILD  L + D
Sbjct: 17  AMPRILLIDDDEHLAAPLTTYFARFGCTLESAVRPSEGLAKLRAGQYDAAILDVMLPEMD 76

Query: 65  SLKHLPHWLMLKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLR-- 122
             +          +P+++LTA+ EV  R+ GL+ GA DYV KPF  +EL+AR++  LR  
Sbjct: 77  GFELCREIRKESDIPIVMLTARGEVMDRVVGLELGADDYVPKPFEPRELVARVQTILRRQ 136

Query: 123 ----PLGSSVLS--YADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDEL 176
               P  SS     +  + +D+  R VL     VEL   EF+LL +L   PG+V+ RD++
Sbjct: 137 RSAPPAASSAQHRVFDGLSIDLDRRQVLRQGERVELTGTEFELLALLAGEPGKVFSRDDI 196

Query: 177 LNLIWGYQYFPTTRTVDNHILHLRQKLPQLD-IETLRGVGYRL 218
           LN + G++    TR VD  +  LR+KL  LD I+TLR  GY L
Sbjct: 197 LNRLRGHEAELYTRAVDIVVSRLRKKLEPLDCIKTLRNAGYAL 239