Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Two-component transcriptional response regulator SMc02366, LuxR family from Variovorax sp. SCN45

 Score =  123 bits (309), Expect = 2e-33
 Identities = 87/226 (38%), Positives = 122/226 (53%), Gaps = 18/226 (7%)

Query: 8   MKRILLIEDDT----LLGQGLRDYLHDHGYACEWVTQSQQVEKHWFSTDLVILDRQL-HD 62
           M R L++EDD      + +G R   H    + +      +      S DLVILDR L ++
Sbjct: 1   MWRCLIVEDDADNARYIAEGFRSLGHVAVISRDGTDALARATGE--SWDLVILDRMLPNE 58

Query: 63  GDSLKHLPHWLML-KALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQL 121
            D L  L     L K  PV+VL+A   +++R+ GLKAG  DY+ KPF+  EL AR EA +
Sbjct: 59  VDGLSILSTMRALGKKTPVLVLSALSALDERVRGLKAGGDDYLAKPFAFSELAARAEALV 118

Query: 122 RPLGSS----VLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELL 177
           R   +     +L  AD+ +D+A R V     P+ L+P+EF+LL  L+ +PG+V  R  LL
Sbjct: 119 RRSRTGPEIRLLQLADLTLDLARRHVERAGRPIALQPREFRLLAYLMMHPGQVVTRTMLL 178

Query: 178 NLIWGYQYFPTTRTVDNHILHLRQKL-----PQLDIETLRGVGYRL 218
             +W YQ+ P T  +D  +  LR KL     P L I T+RGVGY L
Sbjct: 179 EAVWDYQFDPQTNVIDVQVSRLRGKLDAGGAPTL-IHTVRGVGYTL 223