Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., Two-component transcriptional response regulator, OmpR family from Sphingobium sp. HT1-2

 Score =  117 bits (292), Expect = 2e-31
 Identities = 84/223 (37%), Positives = 122/223 (54%), Gaps = 17/223 (7%)

Query: 11  ILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQ--VEKHWFSTDLVILDRQLHDGDSLKH 68
           IL+IEDD    + L   L + G+A   V + ++   +    + D +I+DR L   D L  
Sbjct: 3   ILIIEDDGETREFLSRGLKEVGHAVTLVEEGREGLFQATDSNYDAIIVDRMLPGLDGLSL 62

Query: 69  LPHWLMLKAL----PVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEA----Q 120
           L    ML+A     PV++LTA   +  R+EGL+AGA DY++KPF+  ELLAR+ A    Q
Sbjct: 63  LK---MLRATGDLTPVLMLTAIGRIADRVEGLEAGADDYLVKPFAFSELLARLNALGRRQ 119

Query: 121 LRPLGSSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLI 180
              +  S L+  DI +D   R+V      V L+P+EF LL  L++N  RV  R  LL  +
Sbjct: 120 APQVEQSRLTVGDIDIDFHRRTVHRGGKKVILQPREFSLLAELMRNSHRVVTRTMLLERV 179

Query: 181 WGYQYFPTTRTVDNHILHLRQKLP---QLD-IETLRGVGYRLK 219
           W + + P T  V+ H+  LR KL     +D IET+RG GY ++
Sbjct: 180 WDFDFEPKTNIVETHLSRLRSKLNAGFDVDAIETVRGAGYMIR 222