Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., two component system DNA-binding transcriptional activator QseB from Pseudomonas putida KT2440

 Score =  117 bits (293), Expect = 2e-31
 Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 8/215 (3%)

Query: 11  ILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFST--DLVILDRQLHDGDSLKH 68
           +LL EDD L+  G+   L   G   + V  +        +   D++ILD  L D D LK 
Sbjct: 3   VLLCEDDDLIAAGICAGLTAQGLTVDRVGNAADARAMLQAAQFDVMILDLGLPDEDGLKL 62

Query: 69  LPHWLMLKA--LPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPLGS 126
           L H L  K   LPV+VLTA+  V  R++GL+AGA DY+LKPF  +EL AR+   LR +  
Sbjct: 63  L-HRLREKGETLPVLVLTARDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAG 121

Query: 127 ---SVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIWGY 183
              +V+ +  +  D ++         V+L  +E  LL  LLQNPGRV   ++L + ++G+
Sbjct: 122 RAVNVIEHGPLRYDPSSCEATLAGQHVDLSRREQALLQALLQNPGRVLSSEQLKDCVYGF 181

Query: 184 QYFPTTRTVDNHILHLRQKLPQLDIETLRGVGYRL 218
                +  ++ HI HLR+KL    +ET+RG+GYRL
Sbjct: 182 SDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRL 216