Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  122 bits (307), Expect = 4e-33
 Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 11/222 (4%)

Query: 8   MKRILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQ--VEKHWFSTDLVILDRQLHDGDS 65
           M R+L IEDD + GQ +   L  HG   +W    ++   +      DL+ LDR L + D 
Sbjct: 1   MPRVLTIEDDAVTGQEIVAELTSHGLEVDWADNGREGLAKAIAGGYDLITLDRMLPEVDG 60

Query: 66  LKHLPHWLMLK-ALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLR-- 122
           L  +     LK A P+++++A  +V++R+ GL+AG  DY+ KPF+  E+ AR+E  LR  
Sbjct: 61  LTIVTTLRNLKIATPILMISALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRN 120

Query: 123 --PLGSSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLI 180
             P   + L  AD+ +D+ +         + L P E++LL  L+++ G+V  R  +   +
Sbjct: 121 SVPTTQTRLQVADLQLDLISHEARRGDNTLNLLPTEYKLLEYLMRHSGQVITRMMIFEEV 180

Query: 181 WGYQYFPTTRTVDNHILHLRQKLPQLD----IETLRGVGYRL 218
           WGY + P T  +D HI  LR+K+        I T+RG GY +
Sbjct: 181 WGYHFDPGTNLIDVHIGRLRKKIDSPGQSPLIRTVRGSGYAI 222