Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Enterobacter asburiae PDN3

 Score =  127 bits (319), Expect = 2e-34
 Identities = 79/218 (36%), Positives = 122/218 (55%), Gaps = 6/218 (2%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFST--DLVILDRQLHDGDSLK 67
           RILL+EDD L+G G++  L   G++ +W T  +  +    S   D V+LD  L + D L 
Sbjct: 2   RILLVEDDRLIGDGIKAGLSKMGFSVDWFTDGKTGQAALSSAPYDAVVLDLTLPEIDGLD 61

Query: 68  HLPHWLML-KALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPL-- 124
            L  W    ++ PV++LTA+  + QR+EGL+ GA DY+ KPF+  E+ AR+EA +R    
Sbjct: 62  ILRAWRESGRSEPVLILTARDALNQRVEGLRLGADDYLCKPFALIEVGARLEALVRRSHG 121

Query: 125 -GSSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIWGY 183
              S L +  + +D        N  P+ LKPKEF LL +L++N GRV  R  +   ++ +
Sbjct: 122 QARSELRHGKVTLDPTRLVATLNGEPLTLKPKEFALLELLMRNAGRVLPRKMIEEKLYTW 181

Query: 184 QYFPTTRTVDNHILHLRQKLPQLDIETLRGVGYRLKGA 221
               ++  ++ H+ HLR+KL    I T+ G+GY L  A
Sbjct: 182 DDDVSSNAIEVHVHHLRRKLGSEFIRTVHGIGYTLGDA 219