Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Enterobacter asburiae PDN3

 Score =  121 bits (303), Expect = 1e-32
 Identities = 89/229 (38%), Positives = 124/229 (54%), Gaps = 23/229 (10%)

Query: 8   MKRILLIEDDTLLGQGLRDYLHDHGYACEWVTQS----QQVEKH-WFSTDLVILDRQLHD 62
           MK+ILL+EDD  +   LR  L D GYA           Q++EK  W   D VILD  L +
Sbjct: 1   MKQILLVEDDHDIAALLRLNLEDEGYAITHEPDGGKALQRLEKQPW---DAVILDLMLPN 57

Query: 63  GDSLKHLPHWL-MLKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQL 121
            D L+       M + LPVI+++A+     RI GL+ GA DY+ KPFS QEL+ARI+A  
Sbjct: 58  VDGLEICRRIRQMTRYLPVIIISARSSETDRITGLETGADDYLAKPFSVQELIARIKALF 117

Query: 122 RPLGSSVLSYAD-------IVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRD 174
           R   +   +  D       + +D   RSVL +   V+L P+EF+LL    ++PG V+ R 
Sbjct: 118 RRQQAMGQAQTDGQIQAHGLTIDPLARSVLLHGQVVDLTPREFELLYFFARHPGEVFSRL 177

Query: 175 ELLNLIWGYQYFPTTRTVDNHILHLRQKL------PQLDIETLRGVGYR 217
            LL  +WGYQ+     TV+ HI  LR K+      P++ I T+ G GY+
Sbjct: 178 ALLEQVWGYQHEGYEHTVNTHINRLRIKIEKDAAEPEI-IRTVWGKGYK 225