Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  123 bits (309), Expect = 2e-33
 Identities = 83/223 (37%), Positives = 120/223 (53%), Gaps = 13/223 (5%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFST--DLVILDRQLHDGDSLK 67
           +I ++ED+  L   LR  L   GY  + + +  + E        DL+ILD  L     ++
Sbjct: 4   KIAVVEDEEALSVLLRYNLEAEGYDVDTIPRGDEAEIRLQERIPDLLILDWMLPGVSGIE 63

Query: 68  HLPHWLM---LKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLR-- 122
                 M    + LP+I+LTA+ E  +R+ GL  GA DYV+KPFS  EL+AR++A LR  
Sbjct: 64  LCRRLRMRPETERLPIIMLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLRRA 123

Query: 123 --PLGSSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLI 180
              + SSVL   DI +D     V      V L P EF+LL  L+ +PGRV+ R +LL+ +
Sbjct: 124 RPEVLSSVLKCGDIELDRETHRVHRKSREVRLGPTEFRLLEFLMTSPGRVFSRSQLLDGV 183

Query: 181 WGYQYFPTTRTVDNHILHLRQKL----PQLDIETLRGVGYRLK 219
           WG+  +   RTVD H+  LR+ L     Q  I T+RG GY ++
Sbjct: 184 WGHDIYVDERTVDVHVGRLRKALNFSHMQDVIRTVRGAGYSME 226