Pairwise Alignments

Query, 466 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., alpha-amylase from Serratia liquefaciens MT49

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 93/400 (23%), Positives = 145/400 (36%), Gaps = 87/400 (21%)

Query: 26  ILHAFNWKYAD-------VTANAAQIAAAGYKKVLISPALKSSGNEWWARYQPQDLRVID 78
           +L  F+W Y D           A QIA  G   + + PA K +   +   Y   DL  + 
Sbjct: 7   LLQFFHWYYPDGGKLWQEAAERAEQIAGIGITDLWLPPAYKGASGGYSVGYDSYDLFDLG 66

Query: 79  ---------SPLGNKTDLQTLIKTLQDYGVEVYSDVVFNHMANESWK------------R 117
                    +  G+K  L      L+D GV V  DVVFNH      K            R
Sbjct: 67  EFDQKGSRATKYGDKEALALAANRLRDNGVRVIYDVVFNHKLGADEKEQVHVYKADANNR 126

Query: 118 SDLNYPGSEVLASYTNQAY---------YYQQQKLFGDLSH-------NLFS-QNDFHPE 160
           +D+N  G + LA YT   +         +    K FG + +        +F   ND+  +
Sbjct: 127 NDINDQGFDALA-YTRFTFPGRQGTYSKFIWDYKCFGGVDYVEQPDEKGVFKIANDYGDD 185

Query: 161 GCITDWGN-PGHVQYWRLCGGAGDRGLPDLDANAWVINQQRAYLQ--ALKQMGIRGFRID 217
           G     G+  G+  Y  L G        D++     + ++  Y     ++ +   GFR+D
Sbjct: 186 GWNDQVGDEKGNYDY--LMGA-------DVEFRNPAVTEELKYWARWLMETLPCDGFRLD 236

Query: 218 AVKHMSQYHIDQVFTPEIISGMHVFGEVITSGGQGD-------GSYD-AFLAPYLNNTTH 269
           A KH+  +   +            + + +    Q D        S+D A L  Y++    
Sbjct: 237 AAKHIPAWFFKE------------WADHVRDSAQRDLFIVAEYWSHDLAALQQYIDLVEG 284

Query: 270 AA--YDFPLFASIRAAFSYQG---SMSQLHDPQAYGQALPNARAITFAITHDIPTNDGFR 324
               +D  L      A S QG    M+Q+        A   A ++T    HD        
Sbjct: 285 KVMLFDVALHLKFHQA-SKQGDGFDMAQIFTDTL--TAADPAHSVTLVANHDTQPLQSLE 341

Query: 325 YQILNPQDEQLAYAYLLGKDGGTPLIYSDDLADHEDKDNG 364
             +  P  + LAYA +L ++ G P ++  DL     KD G
Sbjct: 342 APV-EPWFKPLAYALILLREQGVPCVFYPDLYGASYKDKG 380