Pairwise Alignments

Query, 466 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., alpha-amylase from Agrobacterium fabrum C58

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 106/449 (23%), Positives = 163/449 (36%), Gaps = 85/449 (18%)

Query: 26  ILHAFNWKYAD-------VTANAAQIAAAGYKKVLISPALKSSGNEWWARYQPQDL---- 74
           +L  F+W Y D       V   A  +A  G   V + PA K +   +   Y   DL    
Sbjct: 6   LLQFFHWYYPDGGKLWSEVAEKAESLAKMGITDVWLPPAYKGAAGGYSVGYDTYDLFDLG 65

Query: 75  -----RVIDSPLGNKTDLQTLIKTLQDYGVEVYSDVVFNHM--ANESWK----------R 117
                  + +  G++  L+   KTL+D G+ V  DVV NH   A+E  K          R
Sbjct: 66  EFDQKGTVATKYGDRAALEHAGKTLKDNGIRVIHDVVLNHKMGADEKEKVRVRRVNPDDR 125

Query: 118 SDLNYPGSEVLA--SYTNQAYYYQQQKLFGDLSHNLFSQNDFHPEGCITDWGNPGHVQYW 175
           +D++      LA   +T      +  K   DL    FS  D   E        P     +
Sbjct: 126 TDIDDEDFPALAYTRFTFPGRNGKHSKFIWDL--KCFSGVDHIEE--------PTEDGIF 175

Query: 176 RLCGGAGD----------RGLPDLDANAWVINQQRAYLQALK--------QMGIRGFRID 217
           RL    GD           G  D    A V  + RA  + LK        Q+ + GFR+D
Sbjct: 176 RLVNEYGDGEWNEEVDQENGNFDYLMGADVEFRNRAVYEELKYWGRWLSEQVQVDGFRLD 235

Query: 218 AVKHMSQY-------HIDQVFTPEIISGMHVFGEVITSGGQGDGSYDAFLAPYLNNTTHA 270
           A KH+  +       H+ +   P++     V  E      +   SY   +   L      
Sbjct: 236 AAKHIPAWFFRDWVGHMRETVDPDLF----VVAEYWHPDLEALKSYLELVDKQL-----M 286

Query: 271 AYDFPLFASIRAAFSYQG--SMSQLHDPQAYGQALPNARAITFAITHDIPTNDGFRYQIL 328
            +D  L  S   A    G   M  + D      A+P+  A+T    HD          + 
Sbjct: 287 LFDVALHHSFHDASKQGGDFDMRSIFDGSLV-SAVPD-HAVTLVDNHDTQPLQSLEAPV- 343

Query: 329 NPQDEQLAYAYLLGKDGGTPLIYSDDLADHEDKDNGRWANVW--NQPSMQ---HMLRFHN 383
            P  + LAYA +L ++ G P ++  DL      D G   N +  + P+++    ++   +
Sbjct: 344 EPWFKPLAYAIILLREEGVPCVFYPDLFGTSYTDTGNDGNEYKIDIPAIECLPKLIEARS 403

Query: 384 AMQGKPMTVMYSD-SCLMLFKRGKEGVVG 411
                P T ++ D SC+   + G     G
Sbjct: 404 RFANGPQTDIFDDASCIAFIRHGTADAPG 432