Pairwise Alignments

Query, 251 a.a., HTH-type transcriptional regulator UlaR from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 1   MNEVQRHNGILSLLEENQAINVSHIIERFNVSPATARRDIAKLDELGKLRKVRNGAERIE 60
           M + QRHNGI+ L+++   ++   ++E F+VSP T RRD+ +L E   + +   GA    
Sbjct: 1   MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAALPS 60

Query: 61  NQKRKWSPLNINSTEHYEEKSLIALKAAELCQPGDSVVINCGSTAFLLGQQLCG-ENVQI 119
           +     +P +       EEK  IA K AE    G ++ I+ G+T   +   L    N++I
Sbjct: 61  SSVN--TPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRI 118

Query: 120 VTNYFPLASYLINEDHDDVIIIGGQY-NRAQSIFLNPAPDSLGGYAGNWMFTSGKGL-TE 177
           VTN   +A+ L+ ++   +I+ GG+  +R   I      D +  +  ++      G+ ++
Sbjct: 119 VTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSD 178

Query: 178 AGLYKTDMLTAVAEQQMLEQIDKLVVVVDSSKVGQRTGMLFCSTSKIDIVITGKNANAEV 237
             L + D      ++ ++E    +++VVD SK G+   +   S S +D V T       V
Sbjct: 179 GSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAPPPVSV 238

Query: 238 VKAIEAQGTQVIL 250
           ++ +     Q+ L
Sbjct: 239 MQVLTDHHIQLEL 251