Pairwise Alignments

Query, 251 a.a., HTH-type transcriptional regulator UlaR from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., Glucitol operon repressor from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 79.0 bits (193), Expect = 9e-20
 Identities = 59/254 (23%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 1   MNEVQRHNGILSLLEENQAINVSHIIERFNVSPATARRDIAKLDELGKLRKVRNGAERIE 60
           M   QR   IL  L++    +V  + + F+ +  T R+D+  L+  G + +   G   + 
Sbjct: 1   MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGV--VL 58

Query: 61  NQKRKWSPLNINSTEHYEEKSLIALKAAELCQPGDSVVINCGSTAFLLGQQLCG-ENVQI 119
           N++    P++  +  +  +K LIA  A      GDS++++ GST   +   L    N+ +
Sbjct: 59  NKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITV 118

Query: 120 VTNYFPLASYLINEDHDDVIII-GGQYNRAQSIFLNP-APDSLGGYAGNWMFTSGKGLT- 176
           +TN   + + L   D++  I++ GG + +  + F    A ++   +  + +F    G+  
Sbjct: 119 MTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL 178

Query: 177 EAGLYKTDMLTAVAEQQMLEQIDKLVVVVDSSKVGQRTGMLFCSTSKIDIVITGKNANAE 236
            AG+   + +  V++  M     +++++ DSSK G+++  + CS   +D +IT    +  
Sbjct: 179 NAGVTTFNEVYTVSKA-MCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPA 237

Query: 237 VVKAIEAQGTQVIL 250
             +A+E +G  VI+
Sbjct: 238 FRQALEEKGIDVII 251