Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., response regulator transcription factor HprR from Escherichia coli ECRC62

 Score =  158 bits (399), Expect = 1e-43
 Identities = 94/220 (42%), Positives = 129/220 (58%), Gaps = 5/220 (2%)

Query: 1   MRILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGL 60
           M+ILLIED++R   ++ +GL   G+ I  + DG+ GL      +  L+ILD MLP +DG 
Sbjct: 38  MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGW 97

Query: 61  TLCQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNI 120
            + Q +R T  Q  ++ L+A   V++R++GL +GA+DYL KPF F ELLAR+ A  R   
Sbjct: 98  QILQTLR-TAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLR--- 153

Query: 121 QTHTSNK-LRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERILANV 179
           Q H  N  L  + L +   +  V R    I LT KE  +L L   + G I  R  I + +
Sbjct: 154 QHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEI 213

Query: 180 WGIHQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGY 219
           WGI+ D  TN VDV +RRLR K+D PF + LI T RGMGY
Sbjct: 214 WGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGY 253