Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  177 bits (450), Expect = 1e-49
 Identities = 99/228 (43%), Positives = 138/228 (60%), Gaps = 5/228 (2%)

Query: 2   RILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGLT 61
           +ILL+EDD R++ FI +GL+ EG+ +    DG+ GL+       DL+ILD M+P ++G+ 
Sbjct: 3   KILLVEDDSRVSAFIIKGLQEEGYDVALAMDGKTGLQMALQGNYDLVILDIMIPEMNGIE 62

Query: 62  LCQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNI- 120
           +C+ +R     V +L L+ALG  E  + GL +GADDYL+KPF F ELLAR+  L RR+  
Sbjct: 63  VCKALRKQHTHVPVLFLTALGSTENVVMGLDSGADDYLSKPFKFIELLARVRTLMRRSTY 122

Query: 121 ----QTHTSNKLRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERIL 176
               ++ T +  +F DLEL   T  V R    I LT+ E  +L +F++    + SR  IL
Sbjct: 123 SSGSESKTESTYQFGDLELDDETKTVLRNGMAISLTSTEYRLLLMFMKNQRRVLSRIDIL 182

Query: 177 ANVWGIHQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGYYLGDA 224
             VWGI  D  TNVVDVY+  LRKK++      LIQT  GMGY L +A
Sbjct: 183 EEVWGIDFDMGTNVVDVYVNYLRKKLEKYQGPRLIQTVIGMGYVLKEA 230