Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Transcriptional activator protein CopR from Alteromonas macleodii MIT1002

 Score =  207 bits (526), Expect = 2e-58
 Identities = 102/223 (45%), Positives = 145/223 (65%)

Query: 1   MRILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGL 60
           M++LL+EDD ++A  I  GL  EGH+   + DG  G +   S+E D +ILD MLP +DG 
Sbjct: 1   MKVLLVEDDPKVASHIANGLLGEGHECITVGDGTSGYQQASSNELDAVILDVMLPELDGF 60

Query: 61  TLCQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNI 120
           ++ +++R  GN   +L+LSA  +VE++++GLRTGA+DYL KPF FEELLAR+E L  RN 
Sbjct: 61  SVLEKLREEGNTTPVLLLSAKSQVEDKVKGLRTGANDYLTKPFAFEELLARVEGLAGRNK 120

Query: 121 QTHTSNKLRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERILANVW 180
           +      ++  DL L L   +V R +Q I+L +KE  +LE  LR  G + +R  +L  VW
Sbjct: 121 EGEDKTLIKVGDLTLDLVNRKVLRGDQEIDLQSKEFQLLECLLRHKGKVVTRSMLLEQVW 180

Query: 181 GIHQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGYYLGD 223
             H DP TNV+DV++ RLR+K+D  F  PLI+T RG GY + D
Sbjct: 181 NYHFDPQTNVIDVHISRLRQKVDKAFNVPLIETVRGTGYRIAD 223