Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Transcriptional activator protein CzcR from Acinetobacter radioresistens SK82

 Score =  164 bits (415), Expect = 1e-45
 Identities = 95/221 (42%), Positives = 136/221 (61%), Gaps = 2/221 (0%)

Query: 1   MRILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGL 60
           M IL+IED+++IAR++ +GL   G++     DG+ GL   +    DL+ILD MLP ++G 
Sbjct: 1   MNILIIEDEQKIARYLAKGLTESGYRTWLAHDGREGLMLFEQHAIDLVILDVMLPELNGW 60

Query: 61  TLCQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNI 120
            + Q +R   ++V +L L+A   V +R++GL  GADDYL KPF + ELLAR++ L RR+ 
Sbjct: 61  QVIQTLRQF-SEVPVLFLTARDSVLDRVKGLELGADDYLVKPFSYIELLARVKTLLRRS- 118

Query: 121 QTHTSNKLRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERILANVW 180
                 +L+  +L++ L   +VYR    IELT KE ++L       G I +R +I + VW
Sbjct: 119 SAKVVEQLQVENLKIDLLEHKVYRDRNLIELTNKEYALLRFLAEHQGEIMTRTQIASQVW 178

Query: 181 GIHQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGYYL 221
            I+ D  TNVVDV +RRLR KID  +   LI T RGMGY L
Sbjct: 179 NINFDTDTNVVDVAVRRLRAKIDDAYQPKLIHTIRGMGYKL 219