Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 1e-28
 Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 50/351 (14%)

Query: 193 EEAALDALSNVRSVITSLAVFGMVSGALLGVW-LLRTLSKPLAELVKSTTALEQGRLDHR 251
           +EA L A   +RS + +L +  ++ G  +G W L++    PL +  +    +    L HR
Sbjct: 156 DEALLSAY--LRSTVIALPMLLILIG--MGAWWLVQRGLAPLQQFSRVAAKVSTQDLTHR 211

Query: 252 ISISG-PDELKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKAK 310
           +S+   P EL  LA+  N+M   L+   Q                               
Sbjct: 212 LSLDNLPKELGELAQGINFMLHRLDAGVQ------------------------------- 240

Query: 311 HQQKEFFANVSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIEDL 370
            Q  +F  +++HELR+P T ++G+AQ+TL SR    DEY+ +L   +E  E+L+  + D+
Sbjct: 241 -QLTQFSDDLAHELRAPLTNLMGKAQVTL-SRERPSDEYKASLESCTEEMERLSRMVSDM 298

Query: 371 LMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQLCYTD 430
           L L +            + L +  Q V+   +L    + V LT+   A   W T      
Sbjct: 299 LFLAQVSHPAARAGFAPVSLEQEAQRVMELFALSAEDKNVSLTLRGDA---WVTG----- 350

Query: 431 CDKLLM--VIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFER 488
            D+L++   I  L+ NA+R+ P    + L +E  E++  + + + G GI    L  +FER
Sbjct: 351 -DRLMIQRAISNLLSNAIRHTPRDASVLLLVESYEQSVSLSVGNPGRGIEAHHLPHLFER 409

Query: 489 YFRAENGKRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFPR 539
           ++RA+N +     G G+GL + QSI+    G   + S   + T  +L FPR
Sbjct: 410 FYRADNSRARAEGGTGLGLAIVQSIMHLHQGHADVSSQPGRFTRFSLVFPR 460