Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  117 bits (292), Expect = 3e-30
 Identities = 94/379 (24%), Positives = 179/379 (47%), Gaps = 52/379 (13%)

Query: 200 LSNVRSVITSLAVF--GMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLDHRISISGP 257
           L   RS+  SL +   G++  A L + + RT++ P+ ++ ++   L+ G L+ R+   G 
Sbjct: 163 LRGYRSLFASLLLIAIGLICTAALALRISRTINSPIGQIKQAVAQLKDGNLETRLPPLGS 222

Query: 258 DELKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLE---------- 307
            EL  LA   N MA++L+ AQ++       ++  +   T+++ Q L+T+E          
Sbjct: 223 QELDQLASGINRMAETLQNAQEE-------LQHSIDQATEDVRQNLETIEIQNIELDLAR 275

Query: 308 ----KAKHQQKEFFANVSHELRSPATAILGEAQITLRSRHNSDD-EYRQTLLRISESAEQ 362
               +A   + EF AN+SHE+R+P   ILG   +  +S       +Y  T   I +SA+ 
Sbjct: 276 KEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQLDYLGT---IEKSADN 332

Query: 363 LAFRIEDLLMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEW 422
           L   I ++L   + +            L ++ Q  +   +   HA+Q+EL          
Sbjct: 333 LLGIINEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLELV--------- 383

Query: 423 QTQLCYTDCD--------KLLMVIRILVDNALRYDPTQQPIGLNLELDEEAWRVQL---- 470
              L Y D          +L  ++  L+ NA+++      +   +  DE+   VQL    
Sbjct: 384 --SLVYRDTPLALVGDPLRLKQILTNLISNAIKFTREGTIVARAMIEDEQEDSVQLRISV 441

Query: 471 VDQGIGIAEADLSVIFERYFRAENGKRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQG 530
            D GIG++  D+  +F+ + +A+N    +P G G+GL +++ +++Q+ GEI ++S   +G
Sbjct: 442 QDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEG 501

Query: 531 TT--VTLTFPRGEEQDANL 547
           +   ++L  P+  +   +L
Sbjct: 502 SEFWISLNLPKTRDDVEDL 520