Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  105 bits (263), Expect = 4e-27
 Identities = 87/341 (25%), Positives = 164/341 (48%), Gaps = 25/341 (7%)

Query: 210 LAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLDHRISISGPDELKTLARHFNY 269
           LA+F ++   LL   L  +LS+P++ +  +  A++QG     + I    EL  L+RH N 
Sbjct: 173 LALFALLFTFLLARRLAASLSQPISAMGHAVKAIQQGDYKTPLPIVDDSELGDLSRHINN 232

Query: 270 MAQSLEQAQQKERMSRQLIEREVADRTQELAQALQT---LEKAKHQQKEFFANVSHELRS 326
           +A+ L QA ++++              Q +AQ +QT    E+A + + +F A +SHELR+
Sbjct: 233 LAEGLNQASREQQ--------------QAMAQLIQTREEAERANNAKSDFLAMMSHELRT 278

Query: 327 PATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPALT 386
           P   +LG  Q+ L +   ++++     L  SES E L   I D+L   R +         
Sbjct: 279 PMNGVLGMLQL-LETTEMTEEQTEYAALA-SESTEHLLKVINDILDFSRIERAALELEHI 336

Query: 387 ELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQLCYTDCDKLLMVIRILVDNAL 446
              L ++  +  +  +    AQQ  L +         T     D  ++  ++  L+ NAL
Sbjct: 337 PFNLADLINSCAQ--AFQHSAQQRGLALELSIPPGMDTLRVQGDPTRIRQILVNLIGNAL 394

Query: 447 RY----DPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERYFRAENGKRYRPDG 502
           ++    + + +P    L+ +   +   + D GIGI+   L ++F+ + +A++    R  G
Sbjct: 395 KFTEHGNVSIEPHWQTLDHELVWFTCTVRDSGIGISAERLELMFDAFQQADSSISRRYGG 454

Query: 503 LGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFPRGEEQ 543
            G+GL +A+++ +++ G +R +S   +G+  TL  P   +Q
Sbjct: 455 TGLGLPIARTLAERMGGTLRAQSEEARGSVFTLEIPLAIDQ 495