Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 660 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 1e-31
 Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 30/348 (8%)

Query: 210 LAVFGMVSGALLGVW-----LLRTLSKPLAELVKSTTALEQGRLDHRISI-----SGPDE 259
           +A  G+   AL+  W     + RT+++PL  + ++  ALE G+ + R  +      G  E
Sbjct: 193 IAGIGIAMVALIAAWASVRHMARTVARPLRRVSRTVAALEAGQFEVRCGVVEGGTRGTHE 252

Query: 260 LKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKAKHQQKEFFAN 319
           L  LA   + +A+ L+        +RQ+ E  V + T    Q +   E+A   +  F A 
Sbjct: 253 LAVLAHDIDRLAERLQH-------NRQVSEERVREATAVALQRMAEAEQAALSRARFLAA 305

Query: 320 VSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDER 379
            SH+LR P  A+       L     +    R  +LR+ ES E +   ++DLL + R D +
Sbjct: 306 ASHDLRQPLHAMGLFIDGLLPG---ATPAQRPAVLRLQESTEFMGVLLDDLLEISRLDAQ 362

Query: 380 LFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQ--LCYTDCDKLLMV 437
           +  PA+T++ L  ++  +  Q +      +V L         W  +     TD   L  +
Sbjct: 363 VLTPAITKVSLAALFDQIDAQHAATAAEARVRL--------HWSDRGLAVRTDAAMLRRI 414

Query: 438 IRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERYFRAENGKR 497
           +  LV NALR+ P    + +         R+++ D G+GIA      IFE +++  N +R
Sbjct: 415 VGNLVSNALRHAPDGGTVLVAARRCAAGVRIEVRDNGVGIAPIHQGRIFEEFYQVANTER 474

Query: 498 YRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFPRGEEQDA 545
            R  G G+GL +   I   L   I + S L+ G+T   T P     DA
Sbjct: 475 DRRRGFGLGLAICARIATLLGTRITVRSALQAGSTFAFTLPAARAADA 522