Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 99.4 bits (246), Expect = 4e-25
 Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 36/353 (10%)

Query: 194 EAALDALSNVRSVI----TSLAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLD 249
           E +L A+ + R  +    T +  F +V   L G W  R +S+P+  L K+   L  G  D
Sbjct: 138 EISLGAVQSARRSVWLNVTLVLAFSLVGVGLAGWWAARRISEPIRALGKAVDRLGAGE-D 196

Query: 250 HRISISGPDELKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKA 309
             + + G  E++ L   FN  A++L +       S +L++  + + T ELA+  Q LE A
Sbjct: 197 ASVVVEGTSEVRHLQHGFNQAARALAE-------SHRLLQSRINEATAELARKNQQLEVA 249

Query: 310 KHQQKEFFANVSHELRSPATAILGEAQITLRS----RHNSDDEYRQTLLRISESAEQLAF 365
              +    A  SH+LR P  A      +TL S       +D    Q +  I E  + L  
Sbjct: 250 SQAKTRLLAAASHDLRQPLHA------LTLFSDGLANGETDPLKLQRIGHIRECVDSLDR 303

Query: 366 RIEDLLMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQ 425
              +LL L + D  +  P   +  L  ++  + R    +   Q + L V        +T 
Sbjct: 304 LFSELLNLSQLDAGVLQPQWADFPLDRLFDEISRNFRPVAEQQGLRLVVR-------KTD 356

Query: 426 LCYTDCDKLLM--VIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLS 483
           + +  CD +++  ++  LV N+LR+   +  + +      +  R+ +VD G+GIA    +
Sbjct: 357 V-WVRCDYVMLSRILNNLVSNSLRH-TIEGGVLIGARRRGKGVRIDVVDTGVGIAPQHQA 414

Query: 484 VIFERYFRAENGKRYR---PDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTV 533
            +FE +++ E   R       G+G+GL   Q +   L+  + + S L +GT V
Sbjct: 415 RVFEEFYQVEPTGRQAARGARGMGLGLATVQRLADLLNTRVELSSKLHKGTCV 467