Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  117 bits (294), Expect = 1e-30
 Identities = 99/400 (24%), Positives = 188/400 (47%), Gaps = 50/400 (12%)

Query: 175 RQLLTQAISLQQQRTSRYEEAALD----ALSNVRSVITSLAVF--GMVSGALLGVWLLRT 228
           R L T A+  + +R   + E  L      L   R++ TSL +    +    LL + + RT
Sbjct: 135 RDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLILACLALSGLLALRMSRT 194

Query: 229 LSKPLAELVKSTTALEQGRLDHRISISGPDELKTLARHFNYMAQSLEQAQQKERMSRQLI 288
           ++ P+  +  +   L+ G L+ R+   G  EL  LA   N MA++L+ A ++       +
Sbjct: 195 INDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETLQNAHEE-------L 247

Query: 289 EREVADRTQELAQALQTLE--------------KAKHQQKEFFANVSHELRSPATAILGE 334
           +  +   T+++ Q L+T+E              +A   + EF AN+SHE+R+P   ILG 
Sbjct: 248 QHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTPLNGILGF 307

Query: 335 AQITLRSRHNSDD-EYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPALTELLLGEI 393
             +  +S       +Y  T   I +SA+ L   I ++L   + +            L ++
Sbjct: 308 THLLQKSEMTPRQLDYLNT---IEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDL 364

Query: 394 WQAVVRQASLLTHAQQVELTV----NTPAQGEWQTQLCYTDCDKLLMVIRILVDNALRYD 449
            Q  +   +   HA+Q+EL      +TPA           D  +L  ++  LV NA+++ 
Sbjct: 365 IQDTLTILAPAAHAKQLELLSLIYRDTPAS-------LVGDPLRLKQILTNLVSNAIKFT 417

Query: 450 PTQQPIGLNLELDEE-----AWRVQLVDQGIGIAEADLSVIFERYFRAENGKRYRPDGLG 504
             +  I +   L++E       R+ + D GIG++  D+  +F+ + +A+N    +P G G
Sbjct: 418 -REGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTG 476

Query: 505 IGLTLAQSIVKQLDGEIRIESVLEQGTT--VTLTFPRGEE 542
           +GL +++ +++Q+ GEI ++S   +G+   ++L  P+  +
Sbjct: 477 LGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHD 516