Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 931 a.a., two-component sensor histidine kinase BarA from Pectobacterium carotovorum WPP14

 Score =  107 bits (266), Expect = 3e-27
 Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 32/369 (8%)

Query: 176 QLLTQAISLQQQRTSRYEEAALDALSNVRSVITSLAVFGMVSGALLGVWLLRTLSKPLAE 235
           +L T  I LQQ     Y+E  + AL         L +  + +  +    L+R ++ P+  
Sbjct: 163 ELDTSTIRLQQ-----YQEIFIAAL---------LLLLSLGAAVIFAYRLMRDVTTPIRN 208

Query: 236 LVKSTTALEQGRLDHRISISGPDELKTLARHFNYMAQSL-----EQAQQKERMSRQLIE- 289
           +V +   + +G+LD R+      EL  L    N MA SL     E  Q  ++ +  L E 
Sbjct: 209 MVDTVDRIRRGQLDSRVEGYMLGELDMLKNGINSMAMSLTAYHEEMQQNIDQATYDLRET 268

Query: 290 -REVADRTQELAQALQTLEKAKHQQKEFFANVSHELRSPATAILGEAQITLRSRHNSDDE 348
             ++  +  EL  A +  ++A   + EF AN+SHELR+P   ++G  + TL++  N+   
Sbjct: 269 LEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRQTLKTPLNTTQT 328

Query: 349 YRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQ 408
               LL I  SA  L   I D+L   + +            L      VV   +   H +
Sbjct: 329 --DYLLTIERSANNLLNIINDVLDFSKLEAGKLVLEDIPFSLHNTLDDVVMLLAHTAHEK 386

Query: 409 QVELTVNTPAQGEWQTQLCYTDCDKLLMVIRILVDNALRYDPTQQPIGLNLE-----LDE 463
            +ELT++   Q +   Q    D  ++  +I  L+ NA+++   Q  I + +E     L +
Sbjct: 387 GLELTLSI--QNDVPEQFV-GDPLRIQQIITNLLGNAIKFTE-QGNIDIRVEKRRQELHQ 442

Query: 464 EAWRVQLVDQGIGIAEADLSVIFERYFRAENGKRYRPDGLGIGLTLAQSIVKQLDGEIRI 523
               VQ+ D GIGIAE   S +F+ + +A+     R  G G+GL + Q +VK++ G+I  
Sbjct: 443 VQLEVQIRDTGIGIAELQQSQLFQAFRQADTSISRRHGGTGLGLVITQRLVKEMGGDISF 502

Query: 524 ESVLEQGTT 532
           +S L +G+T
Sbjct: 503 QSELSKGST 511