Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 918 a.a., two-component sensor histidine kinase BarA from Escherichia coli ECRC62

 Score =  101 bits (251), Expect = 1e-25
 Identities = 99/387 (25%), Positives = 173/387 (44%), Gaps = 37/387 (9%)

Query: 163 SQSFDRVDDTDLRQLLTQAISLQQQRTSRYEEAALDALSNVRSVITSLAVFGMVSGALLG 222
           S S D  +  ++   +   + L+  R  +Y+E            I+S+ +   +  AL+ 
Sbjct: 145 SPSSDAKNSQNMLGYIALELDLKSVRLQQYKEI----------FISSVMMLFCIGIALIF 194

Query: 223 VW-LLRTLSKPLAELVKSTTALEQGRLDHRISISGPDELKTLARHFNYMAQSLEQAQQKE 281
            W L+R ++ P+  +V +   + +G+LD R+      EL  L    N MA SL  A   E
Sbjct: 195 GWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSL--AAYHE 252

Query: 282 RMSRQLIE-----REVADRTQ----ELAQALQTLEKAKHQQKEFFANVSHELRSPATAIL 332
            M   + +     RE  ++ +    EL  A +  ++A   + EF AN+SHELR+P   ++
Sbjct: 253 EMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVI 312

Query: 333 GEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPALTELLLGE 392
           G  ++TL++        R  L  I  SA  L   I D+L   + +            L  
Sbjct: 313 GFTRLTLKTELTPTQ--RDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRS 370

Query: 393 IWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQLCYTDCDKLLMVIRILVDNALRYDPTQ 452
               VV   +  +H + +ELT+N  +           D  +L  +I  LV NA+++    
Sbjct: 371 TLDEVVTLLAHSSHDKGLELTLNIKSD---VPDNVIGDPLRLQQIITNLVGNAIKFTENG 427

Query: 453 QPIGLNLELDEEAW-------RVQLVDQGIGIAEADLSVIFERYFRAENGKRYRPDGLGI 505
               +++ +++ A         VQ+ D GIGI E D S +F+ + +A+     R  G G+
Sbjct: 428 N---IDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484

Query: 506 GLTLAQSIVKQLDGEIRIESVLEQGTT 532
           GL + Q +V ++ G+I   S   +G+T
Sbjct: 485 GLVITQKLVNEMGGDISFHSQPNRGST 511