Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  105 bits (263), Expect = 2e-27
 Identities = 94/321 (29%), Positives = 137/321 (42%), Gaps = 42/321 (13%)

Query: 220 LLGVWLLRTLSKPLAELVKSTTALEQGRLDHRISI--SGPDELKTLARHFNYMAQSLEQA 277
           +LG+W  R LS   ++L  S  A+ +G+   R  +    P EL  L R FN M   LE  
Sbjct: 107 MLGLWAARPLSVQFSQLAMSARAVARGQFATRARMVPGAPAELTLLTRDFNAMTAQLE-- 164

Query: 278 QQKERMSRQLIEREVADRTQELAQALQTLEKAKHQQKEFFANVSHELRSPATAILGEAQI 337
               R  R+L    VA                          ++HELRSP TA +G  Q 
Sbjct: 165 ----RYERELHASHVA--------------------------MAHELRSPLTAAMGRLQG 194

Query: 338 TLRSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPALTELLLGEIWQAV 397
            L    + DD   Q ++   ++  +L   IEDL +L          A+ +  L  +    
Sbjct: 195 MLDGVFSPDDRQLQMVMNQMQNLNRL---IEDLHVLSMVSAGQL--AIDKTRLNPVALLR 249

Query: 398 VRQASLLTHAQQVELTVNTPAQGEWQTQLCYTDCDKLLMVIRILVDNALRYDPTQQPIGL 457
            R A L  HA     T+      E     C  D  +L  V  IL+DNALRY    +   +
Sbjct: 250 DRIAWLKPHADAAGFTITLHGDEEGY---CLADPLRLGQVFTILMDNALRYAAEGKAQHI 306

Query: 458 NLELDEEAWRVQLVDQGIGIAEADLSVIFERYFRAENGKRYRPDGLGIGLTLAQSIVKQL 517
            +   +  W ++  D G G++ A L  IFER+ RA+  +     G G+GL++AQ+I + L
Sbjct: 307 EVARRQHRWLIRFRDYGPGVSAAFLPSIFERFSRADTSRARHSGGSGLGLSIAQAICEAL 366

Query: 518 DGEIRIESVLEQGTTVTLTFP 538
            G +  E+  E G   TL  P
Sbjct: 367 GGSLTAENHPEGGMCFTLELP 387