Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 869 a.a., PAS domain S-box protein from Bacteroides ovatus ATCC 8483

 Score = 87.4 bits (215), Expect = 2e-21
 Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 19/248 (7%)

Query: 297 QELAQALQTLEKAKHQQKEFFANVSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRI 356
           QE+ +A     +A   +  F AN+SHE+R+P  AI+G + +   +   + +E  Q +  I
Sbjct: 631 QEMREARDKALQADKLKSAFLANMSHEIRTPLNAIVGFSDLLSDTSGFTSEEIAQFIGTI 690

Query: 357 SESAEQLAFRIEDLLMLIRHD----ERLFHPALTELLLGEIWQAVVRQASLLTHAQQVEL 412
           +++   L   I D+L L R +    E +F      LLL       V  +  L     VEL
Sbjct: 691 NKNCGLLLALINDILDLSRIESGTMEFMFAEHNLPLLL-----KTVHDSQRLNMPPGVEL 745

Query: 413 TVNTPAQGEWQTQLCYTDCDKLLMVIRILVDNALRYDPTQQPIGLNLELDEEA--WRVQL 470
            +  P   E   +   TD  +L  V+  L++NA ++  +   I    E DE     R+ +
Sbjct: 746 VLRMP---ESDKKYLTTDNVRLQQVVNNLINNAAKF-TSSGFITFGYEDDEVPGYTRIFV 801

Query: 471 VDQGIGIAEADLSVIFERYFRAENGKRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQG 530
            D G+GI+E  +  IFER+++ +N  +    G G+GL++ Q+I+++L+G I + S + +G
Sbjct: 802 EDTGVGISEEGIRHIFERFYKVDNFTQ----GAGLGLSICQTIIERLNGTISVTSEVGKG 857

Query: 531 TTVTLTFP 538
           T  T+  P
Sbjct: 858 TRFTVRLP 865