Pairwise Alignments

Query, 659 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 778 a.a., ferric citrate outer membrane transporter (fecA) (from data) from Pseudomonas simiae WCS417

 Score = 55.5 bits (132), Expect = 9e-12
 Identities = 110/547 (20%), Positives = 194/547 (35%), Gaps = 88/547 (16%)

Query: 51  DDLSLKQADHMSDLLRDIPGVDVG-----GTHSVNQRINIRGLGE---TNLDIRLDGASQ 102
           ++   + A    D+L  IPGV+       G+H +     IRGL     +   + +DG   
Sbjct: 147 EEFERQGATQAKDVLNRIPGVNAPDNNGTGSHDMALNFGIRGLNPRLASRSTVLMDGIPV 206

Query: 103 HANMFHH--IGNLTLNPDILKSADVQVGNNSVTQS--GLGGSVYFETKNAKDL--LVGGE 156
               +    +    ++   + + DV  G  +V      +GG V F T+   D   + GG 
Sbjct: 207 PFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRYGPQNVGGVVNFVTRAIPDAPTVKGGL 266

Query: 157 QFGARIFGGYASNDNQQGSLTVYGQLSETVDAMVYGQGISRDNFEDGAGKETFGVKGDTY 216
           Q         + + +  G  T    L+        G  I       G  +E    + D  
Sbjct: 267 QTET------SPSSSHDGFKTTGNLLAGGTADNGLGGAILYSGTRGGDWRENSNTRIDDL 320

Query: 217 NVLAKVGFEPAVGHRFQVSYDVYRDQGDYSPRPDMAGSANLGLSK------NRLVPTHYD 270
            +  K   + A        Y        Y  + DM G  N+   K       R     + 
Sbjct: 321 ILKGKYQLDDANSFNAMAQY--------YEGQADMPGGLNVADYKADPYQSTRPYDKFWG 372

Query: 271 RDTITG-SYELKQDKHRGKVTLYSSQTEIDR--DESVMAGVWPGNRLSRNTATNRNVGIN 327
           R T+    Y  +QD+    V  + ++T      D+     + P     R        GI 
Sbjct: 373 RRTMFNVGYRYEQDRREFTVNSFFTKTLRSGYLDQGTFLSLSPREYWVR--------GIE 424

Query: 328 ALFQSDYELAAHRNQVSYGMDYVDQTSKATYGSTPFMEESAVST---------------- 371
             F   ++L    ++V  G  Y+++        TP      + T                
Sbjct: 425 TRFAQGFDLGPTSHEVGVGYRYINEAGHELRYRTPIAANQQIPTTNSRNDRDTRGGTEAN 484

Query: 372 AVFAENKLYVNDVWSLTAGLRFDDFKRKA---MTGTK---DFDEVTWSLGTEWDVTSDWT 425
           A F ++++ +   W++T G+R++  + +    +T  K   D++    +L   + +T +W 
Sbjct: 485 AFFVDDRIDIGK-WTITPGIRYEIIESQQTNNLTNVKYKGDYNTALPALNVLYHLTDNWN 543

Query: 426 LFANARSLFKGPELLETFVRYQDQAR--LADNIKPETGLNTQGGVRFDKTYGDHFVGANF 483
           L+AN    F         V+Y        +  +KPE     + G R+D       +GA  
Sbjct: 544 LYANTEGSFGS-------VQYSQMPNRVTSGEVKPEKARTWELGTRYDDGTLRAEIGAFL 596

Query: 484 TLFKTQIDDHIRTSNSYLISNVGDMEIKGFELSTTYAYQAASAKL-------SYAHSDAN 536
             F  Q + + +T++S +    G+   +G E S  YA    S  L       +YA+ DA 
Sbjct: 597 INFDNQYESN-QTNDSVIAR--GETRHQGIETSINYALDGLSPALAGFDVYATYAYVDAT 653

Query: 537 DVTNGGP 543
            +   GP
Sbjct: 654 -IREDGP 659