Pairwise Alignments

Query, 358 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., hypothetical protein from Escherichia fergusonii Becca

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 18/251 (7%)

Query: 113 LLEGTLRFAYDDLKL----ELCANQHPQALMVNLEQPCIFHRRLHQGMTVRKLNIVLSPD 168
           +LEGT RFA   L+     EL  N+H      +      +  R         + +  SP+
Sbjct: 71  ILEGTSRFAIQGLRRHTDWELARNRHYITHTPDCRGSASYCGRFES------ITLSFSPE 124

Query: 169 TLQKFAQH-SCPLQHFLQQDKALVPLSLNEESWQAVESLLNRRV-IHTISAHIAREATVW 226
           TL  +    S  +++ +           N E+    ++L +  + +H   +H  + +T+W
Sbjct: 125 TLALWVPDISAVIKNKIDSHCCCQQQRCNAETHLTAQALRHALMRMHGGFSHEQKPSTLW 184

Query: 227 RLVHDAVL------QCPKHATSLSQHQEGQSEQWINQLLHYIDQHLHEEICLEQLAERHA 280
                 V+      +  + A+ LS H      Q + +    +   L +   + +LA    
Sbjct: 185 LQGQSLVMLSLVLDEHREDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELARESG 244

Query: 281 MSVSNLQRKFKTRLNMTIAHYIRHRRLQLARQQLERGLVTITEAAYEAGYLHPSNFTAAF 340
           +SV  ++R F+   N ++    +  R+Q AR++L  G  ++   A + GY + S+F+AAF
Sbjct: 245 LSVLKIKRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHFSAAF 304

Query: 341 KKAFGISPQAF 351
           +K FG++P  F
Sbjct: 305 QKQFGVTPSTF 315