Pairwise Alignments

Query, 316 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 12/284 (4%)

Query: 38  RVPKVLAMVFAGIAIAQSSLAFQTITHNRILTPSIMGFDALYMFTQVLVVV---LFGGMS 94
           R+P+ L  +  G  +A S +A Q +  N +  P ++G  +       + +V    FGG+ 
Sbjct: 66  RLPRTLLGLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIVGGSFFGGLP 125

Query: 95  SIAMNVYWNFSLSVAAMLSFSTLLFTFYFRSGHRNLIVLLLLGVILGQLFSSIASFFVML 154
             A   Y     +    L  + L++    R+G  N+  +LL G+ L  L SS    F  L
Sbjct: 126 D-AFGPYLLSFCAFLGGLGVTALVYRLGRRNGQTNVATMLLAGIALTALASSAVGLFTYL 184

Query: 155 MDPNDFASVQANMFASFNNVNTKLVYVVSPLLLLAC---VLLFRQHRVLDVFWLDKDNAV 211
            D    A+++   F +  ++N      + PLLL++    + L R+ + L+   L +  A 
Sbjct: 185 ADD---ATLRTLTFWNLGSLNGASYSRLWPLLLVSAGVAMWLPRRAKALNALLLGESEAN 241

Query: 212 SLGVDVHKVTRNVLLISALLISISTALVGPILFFGLLVTNLTREWFRSYRHSTLLLATSA 271
            LG+DV  + R ++  +AL +  + A  G I F GL+V +L R       H  LL A+  
Sbjct: 242 HLGIDVEGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVR-LLAGPDHRVLLPASVL 300

Query: 272 MSVCALLSGQWIIE-KVFHFGTTLSVVINFIGGIYFLSLLLRNK 314
                LL    +    +      + +V  FIG  +FL LLLR +
Sbjct: 301 AGASLLLFADLVARLALAPAELPIGIVTAFIGAPFFLYLLLRGR 344