Pairwise Alignments

Query, 312 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., iron-siderophore ABC transporter permease from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 8e-30
 Identities = 88/321 (27%), Positives = 157/321 (48%), Gaps = 22/321 (6%)

Query: 8   LVVISFCSLFVGVGNLSLAALFQGDESAWQLLLTS-------RVPRLLAILLSGAGLSIA 60
           LV      L  G   + L AL  G      L  T        R+P  L  +L G  LS+A
Sbjct: 33  LVSAILVDLASGPSGMGLLALLDGILHPSHLSATDQVIIWNVRLPYALMAVLVGCALSLA 92

Query: 61  GLIMQQVSQNRFASPSTSGTIECAMLGYVLSLVLFGHGQNLWLIFGVSM-LGTLVF---- 115
           G  MQ +  N  ASP T G    A LG   SLV+      LW+    ++ +   +F    
Sbjct: 93  GAEMQAILNNPLASPFTLGVSSAAALG--ASLVIVFPVTTLWVSANTAISISAFIFAAAS 150

Query: 116 VFFIQ---RIQFKNVIFVPLIGI--IFG-NVIDSLATFIAYKYDAIQNLSGWAVANFANL 169
           VF +Q   R++   V  + L GI  +F  N + +L   +A + D +Q L  W + +    
Sbjct: 151 VFLLQAMSRLRGAGVESLVLFGIALVFSCNAVVALLQLVATE-DVLQQLVFWTLGSVTRA 209

Query: 170 LKGDFELLYIAIPVAI-FSYLYAARISAVGMGKDFATNLGLNYQQVMIIGVALVSIMSAT 228
                 +L + + V + FS+  A R++ + MG+D A + G++ +++    +  +S++SAT
Sbjct: 210 NWDKLGILALVVAVVLPFSFAAAPRLTLLRMGEDRAQSFGVDVKRLRFFSLLRISLLSAT 269

Query: 229 VVMIVGQLPFLGLIVPNLVSLYYGDNLRKNIPRTAIFGAMFVLLCDLVGRVIIFPYEVPI 288
            V  VG + F+GL+ P++  +  G++ R  +P +A+ GA+ + L  +  ++I+    VP+
Sbjct: 270 AVAFVGTIGFIGLVGPHIARILVGEDQRFLLPASALTGALLLALSSIASKLIMPGVIVPV 329

Query: 289 SMIISILGGSVFIALILRGQR 309
            ++ +++G  +F+ L+ +  R
Sbjct: 330 GIVTALVGVPIFVVLVFKRGR 350