Pairwise Alignments

Query, 333 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., citrate-dependent iron transport, periplasmic protein (VIMSS) from Escherichia coli BW25113

 Score = 69.7 bits (169), Expect = 9e-17
 Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 25/303 (8%)

Query: 31  MKSRIHWAALGLLAAFA-AQAETVTIEHRLGKTTLEQKPQRVVVIGVGALDAIDSFGIEP 89
           M + I +   GLL   + A A TV  EH  G  TLE+ PQR+VV+ +   DA+ +  + P
Sbjct: 1   MLAFIRFLFAGLLLVISHAFAATVQDEH--GTFTLEKTPQRIVVLELSFADALAAVDVIP 58

Query: 90  VAVSKFDGTPDYLAKYKSDKYP--SAGSLFEPDFETIYTQKPDLIVI-GPRASKSYDELS 146
           + ++  +     L + ++   P  S G+  +P  E I   KPDLI+    R +  Y  L 
Sbjct: 59  IGIADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDLIIADSSRHAGVYIALQ 118

Query: 147 KIAPTIVFAAEADQGYWESTQQQWRNLGKVFAIEPAVEAKIEQVDAQFKSIMQYNQQHKS 206
           +IAP ++  +  ++ Y E+ Q     +G++   +  ++A++EQ     + + Q+  Q   
Sbjct: 119 QIAPVLLLKSR-NETYAENLQSA-AIIGEMVGKKREMQARLEQ---HKERMAQWASQLPK 173

Query: 207 DAMLVMSSGG----NLTTFGANSRFSSVYKDFGFSETVPVSKESSHGDLISFEYIREHNP 262
              +   +      NL T    +   SV    G +  VP +   +    I  E +   NP
Sbjct: 174 GTRVAFGTSREQQFNLHT--QETWTGSVLASLGLN--VPAAMAGASMPSIGLEQLLAVNP 229

Query: 263 KTLLVVDRDKVVTKGETNIRQTFENDLVKATTAYKNGHIAYLDVNAWYIAISGVKATEQM 322
             LLV        + E+ +++  ++ L +  TA +   +A +D N W   + G+ A E++
Sbjct: 230 AWLLVAH-----YREESIVKRWQQDPLWQMLTAAQKQQVASVDSNTW-ARMRGIFAAERI 283

Query: 323 VAD 325
            AD
Sbjct: 284 AAD 286