Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  213 bits (542), Expect = 2e-59
 Identities = 128/347 (36%), Positives = 195/347 (56%)

Query: 202 IAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNA 261
           +A  L+++ + SL+  + +R   A +    + A+    L   L+  G DE+  + + FN+
Sbjct: 198 LAIALVMALLVSLIARSIVRPLQAAVNAMGNIASGESDLTRSLDTHGQDEVTQLSRHFNS 257

Query: 262 FIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSE 321
           F  K+   + ++   +  L   +  +   A         Q  +   VATAI+E+   V +
Sbjct: 258 FTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQMELVATAINEVTYGVQD 317

Query: 322 IASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISST 381
           +A NA  AA   + A   + +G+  +     +I  L   +  A +V+ +L+ +   I S 
Sbjct: 318 VAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVEVIRTLSAESTQIGSV 377

Query: 382 LDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRL 441
           L+ IRSI++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R+  ST EIQ +I RL
Sbjct: 378 LEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQGMIERL 437

Query: 442 QTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVV 501
           Q  S  AV+ +    S S + +E + +A  SLT I   +  +N  N  +A+AT +Q+ VV
Sbjct: 438 QGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGLNASIASATLQQAHVV 497

Query: 502 EDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           EDIN+NV +   L+  T+  A++ S ASA L+ LS QLD L+  F++
Sbjct: 498 EDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGLLRQFKV 544