Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  212 bits (540), Expect = 3e-59
 Identities = 129/343 (37%), Positives = 186/343 (54%)

Query: 206 LIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDK 265
           L+++ +TS  +   L             A  +  L  RL++   DE+  +   FN F+D+
Sbjct: 297 LVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDR 356

Query: 266 VHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASN 325
           +H  ++ V E S  L   A   +  A        +Q+D    VATA+ E+ +  +EIASN
Sbjct: 357 LHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASN 416

Query: 326 AAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTI 385
           A   A  A Q+     +G   + + +  I  L  EL  A +++S L    N IS+ L TI
Sbjct: 417 AENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTI 476

Query: 386 RSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTES 445
           R I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ R+ ASTEEIQ  I  LQ  +
Sbjct: 477 RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVT 536

Query: 446 TRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDIN 505
           T AV  M +     +  V    +   SL  I+  I QI+D   Q+A+A EEQS V  DIN
Sbjct: 537 TTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADIN 596

Query: 506 RNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
            N E + +++ + +  A +  + + SL  ++ +L+K +  F+L
Sbjct: 597 VNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639