Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  270 bits (689), Expect = 2e-76
 Identities = 183/541 (33%), Positives = 281/541 (51%), Gaps = 9/541 (1%)

Query: 12  LAIAVAIPAIALLFVAFTSLNTMSVMQAQSNSLYA----NTAAPMRAMAEATSRIPRMRV 67
           L + V +  +++LF+ F  L  M        SLY     +T    R + E  S   ++ +
Sbjct: 57  LKLIVVLIVVSILFLGFKGLTGMQSASDSIESLYTKGMQHTIRAGRILDELGSARSQLLL 116

Query: 68  GIDMMLLQETALKDAKGVLKRVEEARTEDIPEMRQAMQVAVDSQVNPELKEQARKLQARF 127
                   + AL     +   VE  +T      R      + + ++ + K   + L+ + 
Sbjct: 117 AFQHDPSSKYALMHDHPITMHVEGIQTSLTNLHRIVDNEILATVLDVQEKAVIQTLKEKL 176

Query: 128 EQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQILDTLLQQAEQQNHAS 187
           +Q+ R+  EP LQ         A  I      P Y E++K A   LD  +Q  E +N+ S
Sbjct: 177 DQVTRQGFEPALQQLKAEKYDAANLILLQVINPLYNEIKKAAEAFLD--IQTQEGKNNFS 234

Query: 188 VESFEAGRTKQMVII--AAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLE 245
               E  +   MV +  A  LI++   +L+I   + + V +L    +  AA   L  R+ 
Sbjct: 235 ASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG-DLTQRIP 293

Query: 246 LDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRT 305
           + GNDE  DI K  N  +      I     +   LAT A   +  A  T+ N   Q+ +T
Sbjct: 294 VTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQT 353

Query: 306 VQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNAT 365
            Q+A AIH+  ATV E+A +A +AA+ +++A   + +G+KVV E    I+ L N+L    
Sbjct: 354 QQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKML 413

Query: 366 QVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAS 425
             +  LA     I S +D I+SISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAS
Sbjct: 414 AAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAS 473

Query: 426 RSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQIND 485
           R+  ST++I Q + RLQ  S  +   +E+G S +   VE +  A  +L++I + +D+I+ 
Sbjct: 474 RTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRIST 533

Query: 486 QNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGS 545
            N Q+ATA+EEQS V E+IN+N+  I++++ +T+  A + S A+  L RL+  + + V  
Sbjct: 534 MNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVAR 593

Query: 546 F 546
           +
Sbjct: 594 Y 594