Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (555), Expect = 5e-61
 Identities = 132/353 (37%), Positives = 207/353 (58%), Gaps = 4/353 (1%)

Query: 196 TKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDI 255
           T  ++ +   +I+S++ S +       RV+   + ++S  A+L+   RLE   +DE+  +
Sbjct: 283 TALLITVIVVVIVSWLVSFLFRD--LGRVSKALEEIASGDADLT--QRLEPRSDDEVGQL 338

Query: 256 GKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHEL 315
             +FN F+  +H  + +++  S  LA  +   + +A    S    Q+D    VATAI+E+
Sbjct: 339 ASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEM 398

Query: 316 GATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQI 375
            A   EIA NA   A  A +A      G   V + Q  IQ+L  E+  AT+V+  L    
Sbjct: 399 AAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHG 458

Query: 376 NGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQ 435
           + IS+ L TI++I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ R+ AST+EIQ
Sbjct: 459 HQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQ 518

Query: 436 QVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATE 495
           Q+I  LQ  + +AV  M+  R  +D  V+ + +A+ SL +I+  +++I+D   Q+A+A E
Sbjct: 519 QMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAE 578

Query: 496 EQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           EQ++V  +I RN   I  ++ + +  A   +  +A L  LS +L++ +  F+L
Sbjct: 579 EQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631