Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 4e-59
 Identities = 128/376 (34%), Positives = 211/376 (56%), Gaps = 5/376 (1%)

Query: 173 LDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMS 232
           LD   ++ EQ++  ++ +     +  ++ +  G + +++ +L I   LR  +A     ++
Sbjct: 277 LDLGKRKVEQRDREALAARSLLTSVALLAMVVGALAAWLITLQITQPLRQTLA-----VA 331

Query: 233 SAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAH 292
           +  A   L     +   DE+  +  S       +   I  + +   +L+  A+ ++  + 
Sbjct: 332 ARIAKGDLSQVDTVQRRDEMGQLQTSMREMTLSLRDLIGGIDQGVGQLSQAATQLAASSE 391

Query: 293 MTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQN 352
            T+     QR+ T QVATA++++ ATV E+A NA  A+  A  A   +  G +VV E   
Sbjct: 392 DTKLRINQQREETDQVATAMNQMSATVQEVAQNAEQASLAATNADQQAQVGDQVVSEAIG 451

Query: 353 RIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRG 412
           RI+ L  ++D+    +  LA +   I S LD I+S+SEQTNLLALNAAIEAARAGE GRG
Sbjct: 452 RIEQLAGQMDHCLAAMQHLAGESQRIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRG 511

Query: 413 FAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQS 472
           FAVVADEVR LA R++ +TEEI Q+I+ L   +      ++  +S ++  VE S +A  +
Sbjct: 512 FAVVADEVRGLAQRTSTATEEIGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRAGHA 571

Query: 473 LTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASL 532
           L++I   +  I   N Q+ATA+EEQS V E INR+V ++  ++ +TS  +++ + +S  L
Sbjct: 572 LSQITDTVSSIQGMNQQIATASEEQSVVAEQINRSVINVRDVSDQTSAASEQTAASSGEL 631

Query: 533 QRLSSQLDKLVGSFEL 548
           ++L  QL  +VG F +
Sbjct: 632 EQLGQQLRGMVGRFSI 647