Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  239 bits (611), Expect = 2e-67
 Identities = 155/427 (36%), Positives = 236/427 (55%), Gaps = 21/427 (4%)

Query: 137 PMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQILD------TLLQQAEQQNHAS--- 187
           P   A + +D  TA   YRD     +G  +  + Q L       T+L QA Q   AS   
Sbjct: 218 PAEHAASLDDAATAMGGYRDAVTQ-FGNAQLASEQALQRMVEQGTVLLQASQMMTASQTE 276

Query: 188 VESFEAGRTKQMVIIAA------GLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLR 241
           V    A + K ++ +A       GL+ ++  +  II  LR  +     R +   A+  L 
Sbjct: 277 VRDAAAAQAKTLLTVATVLALALGLLAAWAITRQIIIPLRQTL-----RAAERVASGDLT 331

Query: 242 TRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQ 301
             L++   DEL  +  S +     +   I  + +   ++A+ A  +S     T +   +Q
Sbjct: 332 QSLQVQRRDELGQLQASMHRMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQ 391

Query: 302 RDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNEL 361
           +  T QVATA++++ ATV E+A NA  A++ A  A   + EG +VVGE   +I+ L +E+
Sbjct: 392 KVETDQVATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEV 451

Query: 362 DNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 421
            N+++ ++ L T+ + I S LD I+S+++QTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 452 VNSSEAMNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVR 511

Query: 422 TLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQID 481
           +LA R+  STEEI+++I  LQ+ + R    M+  R  +D  VE + +A  SL  I   + 
Sbjct: 512 SLAQRTQQSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVS 571

Query: 482 QINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDK 541
            I   N Q+ATA EEQ+ V E+INR+V ++  ++ +TS  ++E + +S  L RL + L  
Sbjct: 572 SIQAMNQQIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQG 631

Query: 542 LVGSFEL 548
           LVG F L
Sbjct: 632 LVGRFRL 638