Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  216 bits (551), Expect = 1e-60
 Identities = 137/348 (39%), Positives = 198/348 (56%), Gaps = 4/348 (1%)

Query: 205 GLIISFITSLVIITNLRSRVAYLKDRMSS----AAANLSLRTRLELDGNDELCDIGKSFN 260
           G+ I+ + +LV++   RS    L++ + +    A+    L  RL+  G+DE+  +G+ FN
Sbjct: 197 GVGIALLMALVVMLIARSIARPLQEAVQAMGNIASGESDLTRRLDTHGSDEITHLGEHFN 256

Query: 261 AFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVS 320
            F  K+   + ++   +  LA  A  V   A   Q   A Q  +  QVATA++E+   V 
Sbjct: 257 RFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSLQMDQVATAVNEVTYAVQ 316

Query: 321 EIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISS 380
           ++A  A  AA   + A      G++ +     +I  L   +D A QV+  LA     I  
Sbjct: 317 DVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDEAVQVIRDLAGHSTRIGG 376

Query: 381 TLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINR 440
            LD IRSI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R+A ST EI  +I  
Sbjct: 377 VLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTAQSTAEIHTMIEH 436

Query: 441 LQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTV 500
           LQ++S  AV+A++     S   VE + +A  SL  IN  ++ +   N  +A+AT +QS V
Sbjct: 437 LQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNLTALNASIASATLQQSHV 496

Query: 501 VEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           VE+INRNV D   L+ +T+  A + S A  +L RLS +L++L+  F +
Sbjct: 497 VEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLLRQFRV 544