Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  233 bits (593), Expect = 2e-65
 Identities = 140/349 (40%), Positives = 201/349 (57%), Gaps = 6/349 (1%)

Query: 205 GLIISFITSLVIITNLRSRVAYLKDRMSSAAANLS-----LRTRLELDGNDELCDIGKSF 259
           G  ++ ++ L+++   R  V  ++ R+++A   +      L  RL+    DEL D+ + F
Sbjct: 298 GGAVALVSLLLVVLLARGLVRPIR-RVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGF 356

Query: 260 NAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATV 319
           N F+D     I EV   S+ L      V+Q    T      Q++ T  VATA+HE+G TV
Sbjct: 357 NRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTV 416

Query: 320 SEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGIS 379
            +IA NA  AA  ++ A   + + ++VV      I+ +  ++  A   VS LA ++  + 
Sbjct: 417 QDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVD 476

Query: 380 STLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVIN 439
             L  IRSISEQTNLLALNAAIEAARAGE GRGFAVVADEVRTLA R+  ST+E+QQ+I 
Sbjct: 477 EVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQ 536

Query: 440 RLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQST 499
           RL+  +  AV +M+ G+  +   VE S +   SL+ I  Q++ I+D N QVATATEEQS 
Sbjct: 537 RLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSA 596

Query: 500 VVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           V E+INR V+ I+ L  ET+           +L+ L+  L + +G F L
Sbjct: 597 VTEEINRTVQGISDLARETAAEVQGCREECQALRGLADDLARQMGGFRL 645