Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  252 bits (644), Expect = 3e-71
 Identities = 156/416 (37%), Positives = 238/416 (57%), Gaps = 9/416 (2%)

Query: 141 AFANNDMTTAQNIYRDKYAPTYGEMRKQANQILDTLLQQA------EQQNHASVESFEAG 194
           A  ++  T+ Q + R  +A    +          T +++A      +   H    S  AG
Sbjct: 222 ASISDSSTSGQLLNRQGFAMATSDAAGDTQLFASTYVEKAGWYVVAQVPEHELYASLNAG 281

Query: 195 RTKQMVIIAAGLIISF-ITSLVIITNLRSRVAYLKDRMSSAAANLS-LRTRLELDGNDEL 252
            ++Q++I A  +  +F +  + +   L   +  L D           LR+R+ +    E+
Sbjct: 282 -SRQIIIWALVIAGAFALIGIWLAGTLTKPLESLADVFQQLGRGQGDLRSRIPMPEQKEI 340

Query: 253 CDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAI 312
             + + FN FID +H +I +VA+ S  L   A  V++++H T+++  SQRD+T+Q A A+
Sbjct: 341 ARLVEGFNNFIDHLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRDQTLQAAAAL 400

Query: 313 HELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLA 372
            E+G+TV+E+A +A  AA  A  AT +S  G+++     + I  L  ++ + ++V+ SL 
Sbjct: 401 TEMGSTVNEVAQSATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQDVSRVIQSLD 460

Query: 373 TQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTE 432
                I   LDTIR ISEQTNLLALNAAIEAARAG+ GRGF+VVADEVRTLA R+A +T+
Sbjct: 461 EHTAAIGGILDTIRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTLAQRAAQATD 520

Query: 433 EIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVAT 492
           EIQ  I++ Q +S  AV  ME  R+++  VV  + + ++ L +I  +I  IND N QVAT
Sbjct: 521 EIQVKIDKFQQDSKSAVSQMESSRARTTDVVTATNEIDKLLQDIAEEIAHINDVNTQVAT 580

Query: 493 ATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           ATEEQ+TVVEDI+RN+ DI+  + ET +    L   S  L  L+ +L   V  F+L
Sbjct: 581 ATEEQATVVEDISRNINDISASSEETLNATKILVSVSDKLDELAQELSSEVSRFKL 636