Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  107 bits (268), Expect = 3e-28
 Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 2/159 (1%)

Query: 177 YLSTRHALTGTLNRHQLDG-FLKKCLRHRQLANESAVIAVIDIDHFKSVNDLYGHDTGDK 235
           +L+ R ALT   NR++L+   L++C R ++     A+IA+ DID FKS+ND  GH  GD+
Sbjct: 179 FLAERDALTLVANRYRLEKVLLQECDRAQRFRLPLALIAM-DIDDFKSINDRCGHGVGDQ 237

Query: 236 VITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPYHAK 295
            + QV E +    R  DLL R GGDEF+L+   TSL  A  + ++I  +++ + +    K
Sbjct: 238 TLVQVAECLQRCIRPEDLLARWGGDEFVLILPKTSLEIAKTMAANIRLKLKNSPHRDDFK 297

Query: 296 VTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRVS 334
           VT+S+G+AE    + P     RADQALY +K  GK+ VS
Sbjct: 298 VTLSLGVAERQTDEPPAALMVRADQALYRAKAAGKDGVS 336