Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 11/192 (5%)

Query: 156 ACAAIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAV 215
           A   + Y +   + +    L  LS   +LTG LN       L       Q     A IA+
Sbjct: 161 AIGMVCYELAIKLSEHKRALSALSRTDSLTGLLNHGSWKDLLHLKFHKCQQQQSHATIAL 220

Query: 216 IDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDAT 275
           IDIDHFK +ND +GH  GD V+ Q+   +  + RE DL  R GGDEF ++     +  A 
Sbjct: 221 IDIDHFKQINDTHGHIVGDAVLRQLSLELRRNLRENDLAGRYGGDEFCVILPQMPMEQAA 280

Query: 276 LVMSHIGCRIQQTHYPY------HAKVTVSVGLAEALRT-DDPEQWFKRADQALYHSKKM 328
            VM     R+++T   Y        +V++S+GLA+      D   W   AD+ALY +K  
Sbjct: 281 QVME----RMRETFSNYRNPQIPELRVSLSIGLADFQPVFTDAAMWLNAADRALYAAKDT 336

Query: 329 GKNRVSFDEEHV 340
           G+NRV+  +E V
Sbjct: 337 GRNRVNMSDERV 348