Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 5/183 (2%)

Query: 155 SACAAIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIA 214
           S  A ++Y + +A+  L+      + R  LT T NR  +D  L++ +   +       + 
Sbjct: 125 SLLATLLYPMRNAL--LYRAATRSALRDPLTETGNRIAMDQTLQREIDMARRHLNPLSLL 182

Query: 215 VIDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDA 274
           ++DIDHFK++ND +GH  GD V+  V   +    R +D++FR GG+EFL+L  NT    A
Sbjct: 183 MLDIDHFKTINDTHGHAAGDNVLRAVAAAIKGQLRNVDMVFRFGGEEFLILLSNTGRDAA 242

Query: 275 TLVMSHIGCRIQQTHY---PYHAKVTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKN 331
            +V   +    Q   Y       ++TVS+G +  L  +  E   +RAD ALY +K+ G+N
Sbjct: 243 AMVGERLRQAAQTQDYWADDTRIELTVSLGCSTLLAAESAESLLRRADSALYVAKREGRN 302

Query: 332 RVS 334
           R++
Sbjct: 303 RLA 305