Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  108 bits (269), Expect = 3e-28
 Identities = 77/215 (35%), Positives = 105/215 (48%), Gaps = 3/215 (1%)

Query: 127 ITIIIPASIWVLIPHQTAEVTLRFSLAISACAAIMYVVVDAIRKLHTELFYLSTRHALTG 186
           + I  PA I V    Q         L   A   I Y     + +   EL  LS   +L+G
Sbjct: 132 LLIFTPAFIAVTTQAQLYACLPILMLYPLALGWICYRQALTLARHKRELLALSRTDSLSG 191

Query: 187 TLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKSVNDLYGHDTGDKVITQVVEIMNT 246
            LN       L+   +  +  +  AVIA+IDIDHFK++ND YGH TGD V+ Q+ +++  
Sbjct: 192 LLNHGAWKDHLEIEFQRCRRDSMGAVIALIDIDHFKTINDTYGHVTGDIVLRQLSKVLRQ 251

Query: 247 HCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPYH--AKVTVSVGLAE 304
           + R  DL  R GGDEF ++     L  AT VM  +  R     Y      +V++S+GLA 
Sbjct: 252 NLRATDLAGRYGGDEFCVILPGMPLNRATEVMDALRDRFNALAYAQDPTLRVSLSIGLAP 311

Query: 305 ALRTD-DPEQWFKRADQALYHSKKMGKNRVSFDEE 338
              T  D   W   ADQALY +K  G+NRVS  +E
Sbjct: 312 YQPTHADSTSWLNDADQALYDAKSSGRNRVSTVQE 346