Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)

Query: 56  LIIVFQCTLLIEITAIYYQKKTP--WGFRLPLALVVVIVVMAIHIFGTLASYWLFPVLIA 113
           LI+ F  +LL    A+ Y +  P  +G RL + L++   ++A   F +        V++ 
Sbjct: 128 LIVTFAVSLLFFSHALLYLRHRPRVFGQRLMIGLLLAQAIVAALRFVS--------VVMG 179

Query: 114 IAFLLPQKDNLLTITIIIPASIWVLIPHQTAEVTLRFSLAISACAAIMYVVVDAIRKLHT 173
           +A       N +    I   S  VL+            L+IS       V++ A  ++HT
Sbjct: 180 MAGSNLMDGNWIQSLYISMYSFSVLL------------LSIS-------VILMATDRVHT 220

Query: 174 ELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKSVNDLYGHDTG 233
           E  Y++TR +LTG LNR  L   L  C            + ++D+DHFK+VND +GH  G
Sbjct: 221 EFEYMATRDSLTGALNRRAL---LDACRGAFASDRRHMALLMVDLDHFKAVNDRFGHQMG 277

Query: 234 DKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPYH 293
           DKV+ + V  M     +  +L R GG+EF++L   T   +A  + + +   I +   P  
Sbjct: 278 DKVLREAVRRMQRAVGDAGVLGRYGGEEFVVLLPGTGKVEAMAIAARLKQAIGEPFAPDS 337

Query: 294 -----AKVTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRV 333
                  + VS+G+A +      ++   RAD ALY +K MG+++V
Sbjct: 338 PMAEVGSIAVSIGVAASDGGRGVDEVLARADAALYKAKAMGRDQV 382