Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  105 bits (262), Expect = 3e-27
 Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 1/167 (0%)

Query: 167 AIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKSVND 226
           A+   + EL   +   ALTG LNRH ++  L++ L           I +IDIDHFKSVND
Sbjct: 401 ALETANAELDRQARFDALTGLLNRHGMEERLQQALAVSNPDTAPLGIVMIDIDHFKSVND 460

Query: 227 LYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQ 286
            +GH TGD V+  V  +M +  R+ D+  RLGG+EF+L+    +  +A    + +   + 
Sbjct: 461 RFGHATGDLVLKAVAGLMKSRLRKSDIAARLGGEEFVLMLPGANAAEAMQTATDLVRLVG 520

Query: 287 QTHYPYHAKVTVSVGLAEALRTDDP-EQWFKRADQALYHSKKMGKNR 332
           +        +T+S G+++ LR DD      +RAD+ALY +K +G+NR
Sbjct: 521 EAFIDPVGHITISCGVSQMLREDDSVASALRRADKALYAAKSLGRNR 567